The detailed information of tRNA gene sequence


Sequence ID>WENV180090549
Genome IDMPMF02145341
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 348
End posion on genome 424
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taaaagtaat
tRNA gene sequence 
AGGCCAGTAGCTCTAACGGATAGAGCGCCGGACTCCAAATCCGGATGTTGGGGGTTCAAA
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
tttgtgatta
Secondary structure (Cloverleaf model)
>WENV180090549	Trp	CCA
                   t      GCCA tttgtgatta
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      | + | | |     A
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     ATGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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