The detailed information of tRNA gene sequence


Sequence ID>WENV180090552
Genome IDMPMF02145443
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1145
End posion on genome 1220
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
catttgcttt
tRNA gene sequence 
GGGCCTGTAGCTTAGTCAGGTAGAGCGCCGGGCTTTTAACCCGGTGGCCGGGGGTTCGAA
TCCCCTCAGGCCCGCCt
Downstream region at tRNA end position 
gatagagcct
Secondary structure (Cloverleaf model)
>WENV180090552	Lys	TTT
                   t      GCCt gatagagcct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T C C C C     A
      T G A        A      + | | | |     G
    C       T T C G       G G G G G     C
    A       + | | |                 T T
    G       G A G C
      G T A        G     TGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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