The detailed information of tRNA gene sequence


Sequence ID>WENV180090562
Genome IDMPMF02145800
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 572
End posion on genome 481
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgttattgtt
tRNA gene sequence 
GGAGAGTTGGGTGAGAGGCTGAAACCAGAAGTTTGCTAAATTTCCGTAGGATTAATTTTC
TACCGTGGGTTCGAATCCCACACTCTCCGCCA
Downstream region at tRNA end position 
tttagcagct
Secondary structure (Cloverleaf model)
>WENV180090562	Ser	GCT
                   t      GCCA tttagcagct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G T G G       G T G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTAGGATTAATTTTCTACC
                    G - C
                    A - T
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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