The detailed information of tRNA gene sequence


Sequence ID>WENV180090622
Genome IDMPMF02148595
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 231
End posion on genome 155
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ttcctactac
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCAGTCGACTCATAATCGATTGGTCCTTGGTTCAAG
TCCAAGTAGGCCCACCA
Downstream region at tRNA end position 
aactcaacaa
Secondary structure (Cloverleaf model)
>WENV180090622	Ile2	CAT
                   c      ACCA aactcaacaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     G A A C C     A
      T G A        A      | | | | |     A
    T       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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