The detailed information of tRNA gene sequence


Sequence ID>WENV180090650
Genome IDMPMF02150428
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 2761
End posion on genome 2835
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aatcgaatag
tRNA gene sequence 
AGGGGTGTAGTGAAATGGCTATCACTAGGGTCTCCAAAACCCTCATTCAGGGTTCGAATC
CCTGCGCCCCTGCCA
Downstream region at tRNA end position 
cgtcgttcgc
Secondary structure (Cloverleaf model)
>WENV180090650	Trp	CCA
                   g      GCCA cgtcgttcgc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     G T C C C     A
      T A A        A      | | | | |     G
    G       A G T G       C A G G G     C
    G       | | | |                 T T
    C       T C A C
      T A          T     CATT
                    A - T
                    G - C
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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