The detailed information of tRNA gene sequence


Sequence ID>WENV180090710
Genome IDMPMF02153409
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 34942
End posion on genome 34846
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aggctgtcgt
tRNA gene sequence 
GGGAGTGGATGATGTCCGGTGGTGTCCGCGGTCTTCAAAACCGTTGTGGGGCTACGTCGT
AGTCTTGGGTGGGTTCGACTCCCACGCACTCCCGCCA
Downstream region at tRNA end position 
gtcgtgcttg
Secondary structure (Cloverleaf model)
>WENV180090710	SeC	TCA
                   t      GCCA gtcgtgcttg
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T C
                    A     C A C C C     A
      C C T        T      | | | | |     G
    G       G T A G       G T G G G     C
    G       + + | |                 T T
    T       T G T C
      G G          C     TGTGGGGCTACGTCGTAGTCTTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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