The detailed information of tRNA gene sequence


Sequence ID>WENV180090712
Genome IDMPMF02153533
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 453
End posion on genome 528
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ataccgggtt
tRNA gene sequence 
AGGAGTGTAGCTCAGTTGGTAGAGCAGCGGTCTCCAAAACCGCAGGCCGTGGGTTCGAAT
CCTGCCACTCCTGCCA
Downstream region at tRNA end position 
gtaggagtag
Secondary structure (Cloverleaf model)
>WENV180090712	Trp	CCA
                   t      GCCA gtaggagtag
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | + + | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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