The detailed information of tRNA gene sequence


Sequence ID>WENV180090713
Genome IDMPMF02153787
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 18115
End posion on genome 18213
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
catcgagatt
tRNA gene sequence 
GGAAGCGTTCCCAAGGCTGGTGCCTGGCTCGGACTTCAAATCCGATGGGGGGCGCGGCGA
CGCGTCCCCGGCGGGTTCGATTCCCGTCCGCTTCCGCCA
Downstream region at tRNA end position 
ccgatccgaa
Secondary structure (Cloverleaf model)
>WENV180090713	SeC	TCA
                   t      GCCA ccgatccgaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    T     T G C C C     A
      C G G        C      + | | | |     G
    T       A A C C       G C G G G     C
    G         | | |                 T T
    G       C T G G
      T G C        C     TGGGGGGCGCGGCGACGCGTCCCCG
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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