The detailed information of tRNA gene sequence


Sequence ID>WENV180090728
Genome IDMPMF02154784
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1247
End posion on genome 1173
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ggcgcatgcc
tRNA gene sequence 
GGGCGCGTAGCTCAGCGGGAGAGCGCTCGCCTCACACGCGAGAGGTCGCTGGTTCAATCC
CAGCCGCGCCCACCA
Downstream region at tRNA end position 
ccatcgcggt
Secondary structure (Cloverleaf model)
>WENV180090728	Val	CAC
                   c      ACCA ccatcgcggt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C T
                    T     C G A C C     A
        G A        A      | | | | |     A
      C     C T C G       G C T G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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