The detailed information of tRNA gene sequence


Sequence ID>WENV180090775
Genome IDMPMF02156870
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 146
End posion on genome 70
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tttaaaatac
tRNA gene sequence 
CGCGGGGTGGAGCAGCCTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCGACGGTTCAAA
TCCGTCCCCCGCAACCA
Downstream region at tRNA end position 
aaaatttact
Secondary structure (Cloverleaf model)
>WENV180090775	fMet	CAT
                   c      ACCA aaaatttact
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T G C C     A
      C G A        G      | | | | |     A
    C       C G A G       G A C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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