The detailed information of tRNA gene sequence


Sequence ID>WENV180090833
Genome IDMPMF02159864
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 4387
End posion on genome 4484
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gtgatgaccg
tRNA gene sequence 
GGAGGTGCCAGGGTCCCGGTGGGTCCCGCGGACTTCAAATCCGTTGGGCGGCATAGCGAT
GTGTCGTCGGTGGGTTCGACTCCCATGCACCTCCGCCA
Downstream region at tRNA end position 
cnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV180090833	SeC	TCA
                   g      GCCA cnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G          T C
                    C     T A C C C     A
      C C C        A      + | | | |     G
    G       T G G G       G T G G G     C
    G       + + | |                 T T
    T       G T C C
      G G          C     TGGGCGGCATAGCGATGTGTCGTCG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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