The detailed information of tRNA gene sequence


Sequence ID>WENV180090917
Genome IDMPMF02165126
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 8328
End posion on genome 8416
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acaaattctt
tRNA gene sequence 
GGAGAGGTGCGAGAGTGGTTGAATCGGGCGGTCTCGAAAACCGTTGTGCCTTATGGGCAC
CGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttaaccaaat
Secondary structure (Cloverleaf model)
>WENV180090917	Ser	CGA
                   t      GCCA ttaaccaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G         | | |                 T T
    T       A T C G
      T G A        G     TGTGCCTTATGGGCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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