The detailed information of tRNA gene sequence


Sequence ID>WENV180090988
Genome IDMPMF02168939
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1164
End posion on genome 1074
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccggttgcga
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGCTGAAGGCGCGCGCTTGGAAAGCGCGTATACGTTAACCGCGT
ATCGGGGGTTCGAATCCCCCTCCCTCCGCCA
Downstream region at tRNA end position 
aacccattga
Secondary structure (Cloverleaf model)
>WENV180090988	Ser	GGA
                   a      GCCA aacccattga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGTTAACCGCGTATC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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