The detailed information of tRNA gene sequence


Sequence ID>WENV180091021
Genome IDMPMF02170537
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 6487
End posion on genome 6397
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtgttaacat
tRNA gene sequence 
GGAGAGGTGACCGAGCGGCCGAAGGTGCGCGCCTGCTAAGCGTGTGTAGGTTTATCGCCT
ACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tttctttaaa
Secondary structure (Cloverleaf model)
>WENV180091021	Ser	GCT
                   t      GCCA tttctttaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTAGGTTTATCGCCTACC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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