The detailed information of tRNA gene sequence


Sequence ID>WENV180091053
Genome IDMPMF02172447
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 9140
End posion on genome 9053
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctatttgttt
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCTAAAGCGCTCGCCTGCTAAGCGAGTGTCGTTTTACGGCGC
GAGGGTTCGAATCCCTCTCTCTCCACCA
Downstream region at tRNA end position 
aaaattgaaa
Secondary structure (Cloverleaf model)
>WENV180091053	Ser	GCT
                   t      ACCA aaaattgaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C T A        G     TGTCGTTTTACGGCGC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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