The detailed information of tRNA gene sequence


Sequence ID>WENV180091099
Genome IDMPMF02174781
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 18409
End posion on genome 18313
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgctgctggc
tRNA gene sequence 
GGGGATGGCTGAGTCCCGGTGGGCTCCGCGGTCTTCAAAACCGTTGGTGGGTCGCCCGAG
CGAGCCACGGTGGGTTCGACACCCATCCATCCCCGCCt
Downstream region at tRNA end position 
cttatcgcgt
Secondary structure (Cloverleaf model)
>WENV180091099	SeC	TCA
                   c      GCCt cttatcgcgt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C          A C
                    C     T A C C C     A
      C C C        T      + | | | |     G
    G       T G A G       G T G G G     C
    G       + | | |                 T T
    T       G C T C
      G G          C     TGGTGGGTCGCCCGAGCGAGCCACG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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