The detailed information of tRNA gene sequence


Sequence ID>WENV180091106
Genome IDMPMF02175379
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 2059
End posion on genome 2135
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aagtctctat
tRNA gene sequence 
TGCGGGATGGAGCAGTCTGGTAGCTCGTTAGGCTCATAACCTAAAGGTCGTTGGTTCAAA
TCCAGCTCCCGCATCCA
Downstream region at tRNA end position 
atcttatgct
Secondary structure (Cloverleaf model)
>WENV180091106	fMet	CAT
                   t      TCCA atcttatgct
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G A C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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