The detailed information of tRNA gene sequence


Sequence ID>WENV180091115
Genome IDMPMF02175764
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 128607
End posion on genome 128518
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttaattatca
tRNA gene sequence 
AGAGAGGTGGCCGAGCGGTTTAAGGCGCGCGCTTGGAAAGCGTGTATTCTGAGAAATTGG
AATCGAGGGTTCGAATCCCTTCCTCTCTGCta
Downstream region at tRNA end position 
agttgttttt
Secondary structure (Cloverleaf model)
>WENV180091115	Ser	GGA
                   a      GCta agttgttttt
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATTCTGAGAAATTGGAATC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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