The detailed information of tRNA gene sequence


Sequence ID>WENV180091141
Genome IDMPMF02177787
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 422
End posion on genome 333
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgacagttac
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGCTTGTCTCGAAAACAAGTAAACCTGTAAAGGTT
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
attttcactt
Secondary structure (Cloverleaf model)
>WENV180091141	Ser	CGA
                   c      GCCA attttcactt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TAAACCTGTAAAGGTTTC
                    C - G
                    T - A
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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