The detailed information of tRNA gene sequence


Sequence ID>WENV180091210
Genome IDMPMF02182539
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 10003
End posion on genome 10091
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agacgaatta
tRNA gene sequence 
GCGGGGGTCGCATAGTCTGGCCATTGCGTTGGATTGCTAATCCAATGGGAGTTAATCCCA
CGGGGGTTCAAATCCCCCTCCCCGCGCCA
Downstream region at tRNA end position 
agcgatagtg
Secondary structure (Cloverleaf model)
>WENV180091210	Ser	GCT
                   a      GCCA agcgatagtg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C C C C C     A
    C T G A        C      | | | | |     A
  T         T A C G       G G G G G     C
  G           | | |                 T T
  G         T T G C
    C C A          G     TGGGAGTTAATCCCAC
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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