The detailed information of tRNA gene sequence


Sequence ID>WENV180091221
Genome IDMPMF02182773
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1469
End posion on genome 1393
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcgtcccata
tRNA gene sequence 
GGGGGTGTAGCTCAGCTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGCCGCGGGTTCGAG
TCCCGTCACTCCCGCCA
Downstream region at tRNA end position 
ttttccgggg
Secondary structure (Cloverleaf model)
>WENV180091221	Asp	GTC
                   a      GCCA ttttccgggg
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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