The detailed information of tRNA gene sequence


Sequence ID>WENV180091230
Genome IDMPMF02183330
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 4001
End posion on genome 3910
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aagtaaatct
tRNA gene sequence 
GGAGAGGTGTCTGAGTGGTCGAAAGAGCACGATTGGAAATCGTGTATGTTCCGAAAGGGG
CATCGAGGGTTCGAATCCCTCTCTCTCCACCA
Downstream region at tRNA end position 
tcgcacactt
Secondary structure (Cloverleaf model)
>WENV180091230	Ser	GGA
                   t      ACCA tcgcacactt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G A G G G     C
    G         | | |                 T T
    T       A A G A
      C G A        G     TATGTTCCGAAAGGGGCATC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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