The detailed information of tRNA gene sequence


Sequence ID>WENV180091284
Genome IDMPMF02186228
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 7494
End posion on genome 7584
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttgacccaac
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCGTAACGGGGGCGCCTCGAAAGCGTCTTGTCGGGTAACCGG
CACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttttattttc
Secondary structure (Cloverleaf model)
>WENV180091284	Ser	CGA
                   c      GCCA ttttattttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    G T A          G     TTGTCGGGTAACCGGCAC
                    G - C
                    G + T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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