The detailed information of tRNA gene sequence


Sequence ID>WENV180091290
Genome IDMPMF02186585
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1245
End posion on genome 1334
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gattcatttc
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTTGAAGGCGCAGGCTTGGAAAGCTTGTATACTGTTAAAGGTA
TCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tttatttatc
Secondary structure (Cloverleaf model)
>WENV180091290	Ser	GGA
                   c      GCCA tttatttatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACTGTTAAAGGTATC
                    C - G
                    A - T
                    G + T
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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