The detailed information of tRNA gene sequence


Sequence ID>WENV180091314
Genome IDMPMF02187830
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 86
End posion on genome 178
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agtactcaac
tRNA gene sequence 
GGAAAGGTGGGTGAGCTGGTTTAAACCAACGGGTTGCTAACTCGTCGTGCGTCGAAAGAT
GTACCGAGGGTTCGAATCCCTCCCTTTCCGCCA
Downstream region at tRNA end position 
ttaatagagt
Secondary structure (Cloverleaf model)
>WENV180091314	Ser	GCT
                   c      GCCA ttaatagagt
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G T G G       G A G G G     C
  G           | | |                 T T
  T         A A C C
    T T A          A     CGTGCGTCGAAAGATGTACC
                    A - T
                    C - G
                    G - C
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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