The detailed information of tRNA gene sequence


Sequence ID>WENV180091317
Genome IDMPMF02188244
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 625
End posion on genome 549
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnntgt
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCGAA
TCCTACCCCCGCTACCA
Downstream region at tRNA end position 
aatgtggaga
Secondary structure (Cloverleaf model)
>WENV180091317	fMet	CAT
                   t      ACCA aatgtggaga
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     G
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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