The detailed information of tRNA gene sequence


Sequence ID>WENV180091357
Genome IDMPMF02190300
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 15
End posion on genome 104
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aataattttt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTTAAGGCGCACGCTTGGAAAGTGTGTGTACTGTCAAAGGTA
CCGTGGGTTCGAATCCCACTCTCTCCTCCA
Downstream region at tRNA end position 
gattcatttt
Secondary structure (Cloverleaf model)
>WENV180091357	Ser	GGA
                   t      TCCA gattcatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTACTGTCAAAGGTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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