The detailed information of tRNA gene sequence


Sequence ID>WENV180091385
Genome IDMPMF02191642
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 5161
End posion on genome 5237
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aaagacaaga
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAGGTTCAAA
TCCTGTCCCCGCTACCA
Downstream region at tRNA end position 
atcctttcaa
Secondary structure (Cloverleaf model)
>WENV180091385	fMet	CAT
                   a      ACCA atcctttcaa
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     A
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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