The detailed information of tRNA gene sequence


Sequence ID>WENV180091406
Genome IDMPMF02192727
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 383
End posion on genome 477
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tcgcaaagct
tRNA gene sequence 
GGAGGAGGATCGCACCCCGGTGGGGCGCCCGGACTTCAAATCCGGTGAGGCGCGTGCGAC
GCGCCTGGTGGGTTCGACCCCCACCCTCTTCCGCCg
Downstream region at tRNA end position 
gtggcgccgc
Secondary structure (Cloverleaf model)
>WENV180091406	SeC	TCA
                   t      GCCg gtggcgccgc
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     A - T
                     G - C
                     G - C          C C
                    A     C A C C C     A
      C C C        T      | | | | |     G
    C       A C G C       G T G G G     C
    G         | | |                 T T
    G       G G C G
      T G G        C     TGAGGCGCGTGCGACGCGCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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