The detailed information of tRNA gene sequence


Sequence ID>WENV180091422
Genome IDMPMF02194198
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 3982
End posion on genome 3906
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ccccgcactt
tRNA gene sequence 
GGCGCATTCGTCTAGTGGCCCAGGACATCGCCCTCTCAAGGCGAAGATCGCGGGTTCGAA
TCCCGCATGCGCTACCA
Downstream region at tRNA end position 
gtcccccacg
Secondary structure (Cloverleaf model)
>WENV180091422	Glu	CTC
                   t      ACCA gtcccccacg
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     T - A          T A
                    T     C G C C C     A
      T G A        C      | | | | |     G
    G       T C T G       G C G G G     C
    G       + | | |                 T T
    C       G G A C
      C C A        A     AGATC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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