The detailed information of tRNA gene sequence


Sequence ID>WENV180091426
Genome IDMPMF02194405
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 539
End posion on genome 442
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gcggctgcac
tRNA gene sequence 
GGAAGCGAATGGGGTCTGGTGGCCTTCGCGGACTTCAAATCCGTTGGGGGGCGTCGGAAG
GCGTCCTTGCTGGGTTCGATTCCCAGGCGCTTCCGCCA
Downstream region at tRNA end position 
tttttctacc
Secondary structure (Cloverleaf model)
>WENV180091426	SeC	TCA
                   c      GCCA tttttctacc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     A   G          T T
                    A     G A C C C     A
      T C T        T      | | | | |     G
    G       G G G G       C T G G G     C
    G       | | + +                 T T
    T       C C T T
      G G          C     TGGGGGGCGTCGGAAGGCGTCCTTG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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