The detailed information of tRNA gene sequence


Sequence ID>WENV180091433
Genome IDMPMF02194846
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 14347
End posion on genome 14271
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tgtcctccgg
tRNA gene sequence 
TGCGGGGTGGAGCAGTCCGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGAAGGTTCAAA
TCCTTCCCCCGCTACCA
Downstream region at tRNA end position 
ttttttaagt
Secondary structure (Cloverleaf model)
>WENV180091433	fMet	CAT
                   g      ACCA ttttttaagt
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G A A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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