The detailed information of tRNA gene sequence


Sequence ID>WENV180091450
Genome IDMPMF02195833
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 2421
End posion on genome 2331
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgcctgcccc
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGAAGGCGCACGCCTGGAAAGTGTGTATACGTTAATAGCGT
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aatcattccg
Secondary structure (Cloverleaf model)
>WENV180091450	Ser	GGA
                   c      GCCA aatcattccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGTTAATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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