The detailed information of tRNA gene sequence


Sequence ID>WENV180091470
Genome IDMPMF02196856
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 2919
End posion on genome 3010
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtatatatta
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTTGAATGCGGCACCCTGCTAAGGTGTTATTCGATTTAAATCG
AATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
attaaannnn
Secondary structure (Cloverleaf model)
>WENV180091470	Ser	GCT
                   a      GCCA attaaannnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TATTCGATTTAAATCGAATC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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