The detailed information of tRNA gene sequence


Sequence ID>WENV180091511
Genome IDMPMF02199640
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 6548
End posion on genome 6457
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcaggttct
tRNA gene sequence 
GGAGACGTGACCGAGTGGCTGAAGGTGCATGATTGCTAATCATGTGAGTGGGGAAACTTG
CTCCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
tcccgtctcg
Secondary structure (Cloverleaf model)
>WENV180091511	Ser	GCT
                   t      GCCA tcccgtctcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      T G A        G     TGAGTGGGGAAACTTGCTCC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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