The detailed information of tRNA gene sequence


Sequence ID>WENV180091546
Genome IDMPMF02202030
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 3170
End posion on genome 3095
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cagttcagac
tRNA gene sequence 
AGGACAGTAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAAGGTCGCAGGTTCGATC
CCTGTCTGTCCTGCCA
Downstream region at tRNA end position 
gttgaccgcg
Secondary structure (Cloverleaf model)
>WENV180091546	Trp	CCA
                   c      GCCA gttgaccgcg
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C          C T
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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