The detailed information of tRNA gene sequence


Sequence ID>WENV180091659
Genome IDMPMF02210706
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1780
End posion on genome 1873
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcattattgt
tRNA gene sequence 
GGAAGGATGGGTGAGTTGGTTTAAACCAGGAGTTTGCTAAACTTCCGTAGGTTATAATGA
TCTACCGAGGGTTCGAATCCCTCTCCTTCCGCCA
Downstream region at tRNA end position 
caaaaagcta
Secondary structure (Cloverleaf model)
>WENV180091659	Ser	GCT
                   t      GCCA caaaaagcta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G T G G       G A G G G     C
  G           | | |                 T T
  T         A A C C
    T T A          A     CGTAGGTTATAATGATCTACC
                    G - C
                    G + T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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