The detailed information of tRNA gene sequence


Sequence ID>WENV180091683
Genome IDMPMF02211735
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 40495
End posion on genome 40405
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tactgtgatt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGCTCCCCTGCTAAGGGAGTATGGGTGAATAACTC
ATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gaaataatta
Secondary structure (Cloverleaf model)
>WENV180091683	Ser	GCT
                   t      GCCA gaaataatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATGGGTGAATAACTCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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