The detailed information of tRNA gene sequence


Sequence ID>WENV180091774
Genome IDMPMF02219081
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 24010
End posion on genome 24099
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tataattatt
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTTAAGGCGCACGCTTGGAAAGTGTGTGTACTGTTAAAGGTA
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
aatttttaac
Secondary structure (Cloverleaf model)
>WENV180091774	Ser	GGA
                   t      GCCA aatttttaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTACTGTTAAAGGTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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