The detailed information of tRNA gene sequence


Sequence ID>WENV180091792
Genome IDMPMF02220195
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 21343
End posion on genome 21433
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttaaccaac
tRNA gene sequence 
GGAGCGGTGGCTGAGTGGTTGAAAGCGCTCCCCTGCTAAGGGAGTATACCTCAAAAGGGT
ATCGAGGGTTCGAATCCCTCCCGCTCCGCCA
Downstream region at tRNA end position 
gttgattccg
Secondary structure (Cloverleaf model)
>WENV180091792	Ser	GCT
                   c      GCCA gttgattccg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TATACCTCAAAAGGGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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