The detailed information of tRNA gene sequence


Sequence ID>WENV180091799
Genome IDMPMF02220636
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 795
End posion on genome 889
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
acccccctat
tRNA gene sequence 
GGAAGGGACTGTCGGCCGGTGCCGGCCCCGGGCTTCAAACCCGGTGAGGGGCGTCAGACG
TCCCTGGTGGGTTCGACTCCCACTCTCTTCCGCCA
Downstream region at tRNA end position 
gctcggcccg
Secondary structure (Cloverleaf model)
>WENV180091799	SeC	TCA
                   t      GCCA gctcggcccg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     G - C
                     A - T          T C
                    C     C A C C C     A
      C C G        T      | | | | |     G
    G       G C T G       G T G G G     C
    G       | | + |                 T T
    T       C G G C
      G C          C     TGAGGGGCGTCAGACGTCCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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