The detailed information of tRNA gene sequence


Sequence ID>WENV180091889
Genome IDMPMF02226139
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1807
End posion on genome 1881
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cccgcgattt
tRNA gene sequence 
GGCGGAGTAGCTCAGCTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGGGTTCAAG
TCCCTCCTCCGCTACaa
Downstream region at tRNA end position 
gcaaatcccc
Secondary structure (Cloverleaf model)
>WENV180091889	Met	CAT
                   t      ACaa gcaaatcccc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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