The detailed information of tRNA gene sequence


Sequence ID>WENV180091902
Genome IDMPMF02226804
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 42
End posion on genome 129
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cttgatattt
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGAAGGCGCACGCTTGGAAAGCGTGTGTGCGTTCACGCGTA
CCGCGGGTTCGAATCCCGCCCTCTCCGCtc
Downstream region at tRNA end position 
tcttaagccc
Secondary structure (Cloverleaf model)
>WENV180091902	Ser	GGA
                   t      GCtc tcttaagccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TGTGCGTTCACGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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