The detailed information of tRNA gene sequence


Sequence ID>WENV180091980
Genome IDMPMF02232016
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 1084
End posion on genome 994
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttaaagataa
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGGCGGTTTCGAAAGCCGTTGACGGGTAATCCTCG
TCCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gagataataa
Secondary structure (Cloverleaf model)
>WENV180091980	Ser	CGA
                   a      GCCA gagataataa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G T C G       G G G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGACGGGTAATCCTCGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T + G
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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