The detailed information of tRNA gene sequence


Sequence ID>WENV180092013
Genome IDMPMF02233967
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 70
End posion on genome 159
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcgcgcctgc
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGCTGAAGGCGCACGCTTGGAAAGCGTGTGTGCGTTTACGCGTA
CCGTGGGTTCGAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
atttttctac
Secondary structure (Cloverleaf model)
>WENV180092013	Ser	GGA
                   c      GCCA atttttctac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TGTGCGTTTACGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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