The detailed information of tRNA gene sequence


Sequence ID>WENV180092022
Genome IDMPMF02234561
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 743
End posion on genome 670
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GGCGCGGTGGGAGAGAGGCTATCCAGCGGATTGCAAATCCGTTCACACCGGTTCGAATCC
GGTCCGCGCCTCCA
Downstream region at tRNA end position 
ttccatgcga
Secondary structure (Cloverleaf model)
>WENV180092022	Cys	GCA
                   c      TCCA ttccatgcga
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     T G G C C     A
        G A        G      | | | | |     G
      A     G A G G       A C C G G     C
      G       | | |                 T T
      G     A T C C
        C T        A     TCAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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