The detailed information of tRNA gene sequence


Sequence ID>WENV180092060
Genome IDMPMF02237408
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 28
End posion on genome 116
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attccgaacc
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTTAAGGTGACAGACTCGAAATCTGTTGTACGTCATGCGTAC
CGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aataaactga
Secondary structure (Cloverleaf model)
>WENV180092060	Ser	CGA
                   c      GCCA aataaactga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C T       G G G G G     C
    G         | |                   T T
    T       A G G T
      T T A        G     TGTACGTCATGCGTACC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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