The detailed information of tRNA gene sequence


Sequence ID>WENV180092076
Genome IDMPMF02238403
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 993
End posion on genome 1064
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccgtgactac
tRNA gene sequence 
GGGATCATAGCTCAGTGGTAGAGCAATCGGCTGCAGTCCGATAGGTCTTCTGTTCGATCC
AGAATGGTCCCTttt
Downstream region at tRNA end position 
ttttctctct
Secondary structure (Cloverleaf model)
>WENV180092076	Cys	GCA
                   c      Tttt ttttctctct
                     G - C
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     A - T          C T
                    T     A A G A C     A
        G A        A      | | | | |     G
      T     C T C G       T T C T G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    A - T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       T
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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