The detailed information of tRNA gene sequence


Sequence ID>WENV180092093
Genome IDMPMF02239181
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 112352
End posion on genome 112277
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cacacaaact
tRNA gene sequence 
GGGGCCATAGCTCAGTTGGTAGAGCGCTACAATGGCATTGTAGAGGTCAGCAGTTCGATC
CTGCTTGGCTCCACCA
Downstream region at tRNA end position 
gacattttgt
Secondary structure (Cloverleaf model)
>WENV180092093	Ala	GGC
                   t      ACCA gacattttgt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     T C G T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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