The detailed information of tRNA gene sequence


Sequence ID>WENV180092096
Genome IDMPMF02239181
Search identical group
Phylum/Class[MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter
Species
Start position on genome 53096
End posion on genome 53006
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcaccccatt
tRNA gene sequence 
GGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTAAACGTTTATAGCGT
TTCGAGGGTTCGAATCCCTCTCTCACCGCCA
Downstream region at tRNA end position 
aatttagttt
Secondary structure (Cloverleaf model)
>WENV180092096	Ser	GGA
                   t      GCCA aatttagttt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TAAACGTTTATAGCGTTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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